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Lieber Institute for Brain Development

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  1. spatialLIBD spatialLIBD Public

    Code for the spatialLIBD R/Bioconductor package and shiny app

    R 112 22

  2. HumanPilot HumanPilot Public

    Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project

    HTML 94 30

  3. recount3 recount3 Public

    Explore and download data from the recount3 project

    R 38 5

  4. spatialDLPFC spatialDLPFC Public

    spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples

    HTML 30 5

  5. 10xPilot_snRNAseq-human 10xPilot_snRNAseq-human Public

    10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC

    HTML 25 10

  6. dotdotdot dotdotdot Public

    Example vignette for dotdotdot software

    MATLAB 18 12

Repositories

Showing 10 of 132 repositories
  • LFF_spatial_ERC Public

    LFF_spatial_ERC

    LieberInstitute/LFF_spatial_ERC’s past year of commit activity
    HTML 2 MIT 0 0 0 Updated Mar 30, 2026
  • spatialdACC Public

    spatialdACC project

    LieberInstitute/spatialdACC’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 30, 2026
  • LFF_spatial_LC Public

    LFF project, spatial_LC data analysis

    LieberInstitute/LFF_spatial_LC’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 29, 2026
  • spatial_NAc Public

    Paired snRNA-seq/Visium for human NAc

    LieberInstitute/spatial_NAc’s past year of commit activity
    HTML 0 0 1 0 Updated Mar 28, 2026
  • DeconvoBuddies Public

    Helper Functions for LIBD Deconvolution

    LieberInstitute/DeconvoBuddies’s past year of commit activity
    R 8 Artistic-2.0 3 6 0 Updated Mar 27, 2026
  • recount3 Public

    Explore and download data from the recount3 project

    LieberInstitute/recount3’s past year of commit activity
    R 38 Artistic-2.0 5 21 0 Updated Mar 27, 2026
  • spatialLIBD Public

    Code for the spatialLIBD R/Bioconductor package and shiny app

    LieberInstitute/spatialLIBD’s past year of commit activity
    R 112 Artistic-2.0 22 25 1 Updated Mar 26, 2026
  • 10xPilot_snRNAseq-human Public

    10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC

    LieberInstitute/10xPilot_snRNAseq-human’s past year of commit activity
    HTML 25 Artistic-2.0 10 0 0 Updated Mar 26, 2026
  • HumanPilot Public

    Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project

    LieberInstitute/HumanPilot’s past year of commit activity
    HTML 94 Artistic-2.0 30 1 0 Updated Mar 26, 2026
  • spatialDLPFC Public

    spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples

    LieberInstitute/spatialDLPFC’s past year of commit activity
    HTML 30 Artistic-2.0 5 1 0 Updated Mar 26, 2026

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